Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03901 and BSU26890

See DNA alignment / Visit BSNT_03901 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:00
# Commandline: needle
#    -asequence pep-align/BSNT_03901___csn.1.22522.seq
#    -bsequence pep-align/BSU26890___csn.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03901___csn-BSU26890___csn.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03901___csn-BSU26890___csn.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03901___csn
# 2: BSU26890___csn
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     271/277 (97.8%)
# Similarity:   271/277 (97.8%)
# Gaps:           6/277 ( 2.2%)
# Score: 1396.5
# 
#
#=======================================

BSNT_03901___      1 MKISMQ------KAAISLLVFTMFFTLMMSETVFAAGLNKDQKRRAEQLT     44
                     ||||||      ||||||||||||||||||||||||||||||||||||||
BSU26890___cs      1 MKISMQKADFWKKAAISLLVFTMFFTLMMSETVFAAGLNKDQKRRAEQLT     50

BSNT_03901___     45 SIFENGTTEIQYGYVERLDDGRGYTCGRAGFTTATGDALEVVEVYTKAVP     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26890___cs     51 SIFENGTTEIQYGYVERLDDGRGYTCGRAGFTTATGDALEVVEVYTKAVP    100

BSNT_03901___     95 NNKLKKYLPELRRLAKEESDDTSNLKGFASAWKSLANDKEFRAAQDKVND    144
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26890___cs    101 NNKLKKYLPELRRLAKEESDDTSNLKGFASAWKSLANDKEFRAAQDKVND    150

BSNT_03901___    145 HLYYQPAMKRSDNAGLKTALARAVMYDTVIQHGDGDDPDSFYALIKRTNK    194
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26890___cs    151 HLYYQPAMKRSDNAGLKTALARAVMYDTVIQHGDGDDPDSFYALIKRTNK    200

BSNT_03901___    195 KAGGSPKDGIDEKKWLNKFLDVRYDDLMNPANHDTRDEWRESVARVDVLR    244
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26890___cs    201 KAGGSPKDGIDEKKWLNKFLDVRYDDLMNPANHDTRDEWRESVARVDVLR    250

BSNT_03901___    245 SIAKENNYNLNGPIHVRSNEYGNFVIK    271
                     |||||||||||||||||||||||||||
BSU26890___cs    251 SIAKENNYNLNGPIHVRSNEYGNFVIK    277


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.