Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03872 and BSU26630

See DNA alignment / Visit BSNT_03872 in genome browser / Return to Orthologue table 
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:57
# Commandline: needle
#    -asequence pep-align/BSNT_03872___yrdQ.1.22522.seq
#    -bsequence pep-align/BSU26630___yrdQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03872___yrdQ-BSU26630___yrdQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03872___yrdQ-BSU26630___yrdQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03872___yrdQ
# 2: BSU26630___yrdQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     286/288 (99.3%)
# Similarity:   287/288 (99.7%)
# Gaps:           0/288 ( 0.0%)
# Score: 1462.0
# 
#
#=======================================

BSNT_03872___      1 MELRDLQIFKCVAHHKSITGAAKELNYVQSNVTARIKQLENELKTPLFNR     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26630___yr      1 MELRDLQIFKCVAHHKSITGAAKELNYVQSNVTARIKQLENELKTPLFNR     50

BSNT_03872___     51 HKKGVSLSPEGRKMIEYVNKILKDVEELEQVFLDTEIPSGILKIGTVETV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26630___yr     51 HKKGVSLSPEGRKMIEYVNKILKDVEELEQVFLDTEIPSGILKIGTVETV    100

BSNT_03872___    101 RILPTIIASYYKKYPNVDLSLQAGLTEELIKKVMNHELDGAFISGPLKHS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26630___yr    101 RILPTIIASYYKKYPNVDLSLQAGLTEELIKKVMNHELDGAFISGPLKHS    150

BSNT_03872___    151 ILEQYDVYTEKLTLVTSNKTFNIEDFSTTPILVFNQGCGYRSRLEQWLKD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26630___yr    151 ILEQYDVYTEKLTLVTSNKTFNIEDFSTTPILVFNQGCGYRSRLEQWLKD    200

BSNT_03872___    201 EGVLPNRMMEFNILETILNSVALGLGITVVPESAVMHLAAQGKVYCHPLP    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU26630___yr    201 EGVLPNRMMEFNILETILNSVALGLGITVVPESAVMHLAVQGKVYCHPLP    250

BSNT_03872___    251 EKDSCISTIFIRHKDAYLTNSMRSLLKTIVEHKNMSMS    288
                     |||||||||||||||||||||||||||||||||||||:
BSU26630___yr    251 EKDSCISTIFIRHKDAYLTNSMRSLLKTIVEHKNMSMA    288


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