Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05024 and BSU25900

See DNA alignment / Visit BSNT_05024 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_05024___xlyA.1.22522.seq
#    -bsequence pep-align/BSU25900___cwlA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05024___xlyA-BSU25900___cwlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05024___xlyA-BSU25900___cwlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05024___xlyA
# 2: BSU25900___cwlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity:     148/320 (46.2%)
# Similarity:   192/320 (60.0%)
# Gaps:          55/320 (17.2%)
# Score: 709.0
# 
#
#=======================================

BSNT_05024___      1 -MVNIIQDFIPKGNKN-RPAYPMNPHYITVHNTSNTAKGADAASHARYVK     48
                      .:.::::.:.|.... :...||...|||:|||:|   .|.||:...|:|
BSU25900___cw      1 MAIKVVKNLVSKSKYGLKCPNPMKAEYITIHNTAN---DASAANEISYMK     47

BSNT_05024___     49 NPETATSWHFTVDDKEIYQHLPLNENGWHAGDG-NGTGNRKSIGIEICEN     97
                     |..::||:||.||||::.|.:|.|.|.||.||| ||||||||||:|||.:
BSU25900___cw     48 NNSSSTSFHFAVDDKQVIQGIPTNRNAWHTGDGTNGTGNRKSIGVEICYS     97

BSNT_05024___     98 SDGD--FEKAVSNAQWLIKKLMKEQGISFANVVPHKHWSGKECPRKLLN-    144
                     ..|.  ::.|...|...:.:|:||:|.....|..|:.|:||.||.::|: 
BSU25900___cw     98 KSGGVRYKAAEKLAIKFVAQLLKERGWGIDRVRKHQDWNGKYCPHRILSE    147

BSNT_05024___    145 -RWDSFKAGISGAASSPTKTVKKTAGDTYTVKKGDTLSEIAKEHGVSVAN    193
                      ||...|..|..       .:||..|.|                      
BSU25900___cw    148 GRWIQVKTAIEA-------ELKKLGGKT----------------------    168

BSNT_05024___    194 LQSWNNIKDPNKITVGQKLKLTGSSTSSTKPSSKKTSYALPSGTFKVTNP    243
                             :.:|.:|.:|        .:|..||||||||||||.|||.:|
BSU25900___cw    169 --------NSSKASVAKK--------KTTNTSSKKTSYALPSGIFKVKSP    202

BSNT_05024___    244 MRKGDDVRRIQKALAALYFYPDKGAKNNGIDGVYGPKTANAVKRFQSMYG    293
                     |.:|:.|.:||||||||||||||||||||||||||||||:|::|||||||
BSU25900___cw    203 MMRGEKVTQIQKALAALYFYPDKGAKNNGIDGVYGPKTADAIRRFQSMYG    252

BSNT_05024___    294 LTQDGIYGSKTKAKLESLLK    313
                     ||||||||.|||||||:|||
BSU25900___cw    253 LTQDGIYGPKTKAKLEALLK    272


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