Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03826 and BSU25720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:55
# Commandline: needle
# -asequence pep-align/BSNT_03826___yqeD.1.22522.seq
# -bsequence pep-align/BSU25720___yqeD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03826___yqeD-BSU25720___yqeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03826___yqeD-BSU25720___yqeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03826___yqeD
# 2: BSU25720___yqeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 204/208 (98.1%)
# Similarity: 207/208 (99.5%)
# Gaps: 0/208 ( 0.0%)
# Score: 1030.0
#
#
#=======================================
BSNT_03826___ 1 MLKKVIGILVIIAIIAVGFFQKEAWLDAIKAGGMFSVLFSMLLIAADVFF 50
|||||||||||||||:||||||||||||||||||||||||||||||||||
BSU25720___yq 1 MLKKVIGILVIIAIISVGFFQKEAWLDAIKAGGMFSVLFSMLLIAADVFF 50
BSNT_03826___ 51 PIVPFALVAALNGAVFGTANGIWITLTGSMLGTILLFFLARYSFRDWARK 100
|||||||:||||||||||||||||||||||||||||||||||||||||||
BSU25720___yq 51 PIVPFALIAALNGAVFGTANGIWITLTGSMLGTILLFFLARYSFRDWARK 100
BSNT_03826___ 101 KVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLIMNVICGLSQVRWHV 150
|||||||||||||||||||||||||||||||||||:||||||||||||||
BSU25720___yq 101 KVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRWHV 150
BSNT_03826___ 151 FFFASLIGKIPNIVVVTIAGANFTSNKLLSISIYGAYILIIMLVIYKKFP 200
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU25720___yq 151 FFFASLIGKIPNIVVVTIAGANFTSNKLLSISIYGTYILIIMLVIYKKFP 200
BSNT_03826___ 201 HLLKVPKK 208
||||||||
BSU25720___yq 201 HLLKVPKK 208
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