Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03785 and BSU25410

See DNA alignment / Visit BSNT_03785 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_03785___rpsU.1.22522.seq
#    -bsequence pep-align/BSU25410___rpsU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03785___rpsU-BSU25410___rpsU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03785___rpsU-BSU25410___rpsU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03785___rpsU
# 2: BSU25410___rpsU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 57
# Identity:      57/57 (100.0%)
# Similarity:    57/57 (100.0%)
# Gaps:           0/57 ( 0.0%)
# Score: 278.0
# 
#
#=======================================

BSNT_03785___      1 MSKTVVRKNESLEDALRRFKRSVSKTGTLQEARKREFYEKPSVKRKKKSE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25410___rp      1 MSKTVVRKNESLEDALRRFKRSVSKTGTLQEARKREFYEKPSVKRKKKSE     50

BSNT_03785___     51 AARKRKF     57
                     |||||||
BSU25410___rp     51 AARKRKF     57


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