Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03730 and BSU24980

See DNA alignment / Visit BSNT_03730 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_03730___pstC.1.22522.seq
#    -bsequence pep-align/BSU24980___pstC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03730___pstC-BSU24980___pstC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03730___pstC-BSU24980___pstC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03730___pstC
# 2: BSU24980___pstC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     308/309 (99.7%)
# Similarity:   308/309 (99.7%)
# Gaps:           0/309 ( 0.0%)
# Score: 1515.0
# 
#
#=======================================

BSNT_03730___      1 MINNRENMSVSERLISSRQNRQLDEVRGRMIVTACALIMIAASVAITIFL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps      1 MINNRENMSVSERLISSRQNRQLDEVRGRMIVTACALIMIAASVAITIFL     50

BSNT_03730___     51 GVKGLQSFLVNGVSPIEFLTSLNWNPTDSDPKYGVLPFIFGSFAVTILSA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps     51 GVKGLQSFLVNGVSPIEFLTSLNWNPTDSDPKYGVLPFIFGSFAVTILSA    100

BSNT_03730___    101 LIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    101 LIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLV    150

BSNT_03730___    151 PFIAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSY    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    151 PFIAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSY    200

BSNT_03730___    201 ALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    201 ALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVL    250

BSNT_03730___    251 PESLFDTAGTLTTIITLNMGHTTYGSVENNTLWSMGLVLLVMSFLFILLI    300
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    251 PESPFDTAGTLTTIITLNMGHTTYGSVENNTLWSMGLVLLVMSFLFILLI    300

BSNT_03730___    301 RYLSSRRKV    309
                     |||||||||
BSU24980___ps    301 RYLSSRRKV    309


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.