Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03724 and BSU24940

See DNA alignment / Visit BSNT_03724 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_03724___yqzC.1.22522.seq
#    -bsequence pep-align/BSU24940___yqzC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03724___yqzC-BSU24940___yqzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03724___yqzC-BSU24940___yqzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03724___yqzC
# 2: BSU24940___yqzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     148/154 (96.1%)
# Similarity:   151/154 (98.1%)
# Gaps:           0/154 ( 0.0%)
# Score: 733.0
# 
#
#=======================================

BSNT_03724___      1 MTKRGIQAFAGGIILATAVLAAVFYLTDEDQAAAVKDNKTVTEQDVNNYL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24940___yq      1 MTKRGIQAFAGGIILATAVLAAVFYLTDEDQAAAVKDNKTVTEQDVNNYL     50

BSNT_03724___     51 DSKKMVSVNRDEYQKLLDSKEKSLTDDSSSDTKTDKVKTYKLKIKDGMST    100
                     ||||:|||||||||||||||||||.:||.||||:||||||||.|||||||
BSU24940___yq     51 DSKKLVSVNRDEYQKLLDSKEKSLNNDSGSDTKSDKVKTYKLTIKDGMST    100

BSNT_03724___    101 ADVSAILEKEGIISSAQDFNDYVIDAGYHKEIRAGEFKVKSDMSFKKIVK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24940___yq    101 ADVSAILEKEGIISSAQDFNDYVIDAGYHKEIRAGEFKVKSDMSFKKIVK    150

BSNT_03724___    151 TLTR    154
                     ||||
BSU24940___yq    151 TLTR    154


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.