Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03695 and BSU24760

See DNA alignment / Visit BSNT_03695 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_03695___yqhA.1.22522.seq
#    -bsequence pep-align/BSU24760___rsbRD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03695___yqhA-BSU24760___rsbRD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03695___yqhA-BSU24760___rsbRD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03695___yqhA
# 2: BSU24760___rsbRD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     274/278 (98.6%)
# Similarity:   275/278 (98.9%)
# Gaps:           0/278 ( 0.0%)
# Score: 1390.0
# 
#
#=======================================

BSNT_03695___      1 MIALDQHLTEHKEDITQQWLEVCTSKGSWLYSAKDQQKLEQKLKDQHELL     50
                     ||||||||||||:||||||||||||.||||||||||||||||||||||||
BSU24760___rs      1 MIALDQHLTEHKKDITQQWLEVCTSNGSWLYSAKDQQKLEQKLKDQHELL     50

BSNT_03695___     51 VTIVAKSLRKEDVEDELNRWSLQCARDRAVHEVTVTQSVGHFNTFRHIMF    100
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU24760___rs     51 VTIVAKSLRKEDVEDELNRWSLQCARDRAVHEVTVTQSVGQFNTFRHIMF    100

BSNT_03695___    101 EWIQKFSEASSQDISIQEFYEWSRILNQNIDEIIEVFTEEYHQVTMIQLN    150
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU24760___rs    101 EWIHKFSEASSQDISIQEFYEWSRILNQNIDEIIEVFTEEYHQVTMIQLN    150

BSNT_03695___    151 AQKEMINELSAPIMPITDGIGILPLVGEIDTHRARTILESVLEQCSALKL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24760___rs    151 AQKEMINELSAPIMPITDGIGILPLVGEIDTHRARTILESVLEQCSALKL    200

BSNT_03695___    201 SYLFLDISGVPIVDTMVAYQIFKVIDSTKLLGIETIISGIRPEIAQTVVK    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24760___rs    201 SYLFLDISGVPIVDTMVAYQIFKVIDSTKLLGIETIISGIRPEIAQTVVK    250

BSNT_03695___    251 LGLDFSNVKTEQSLAKALANKGFKIKEC    278
                     ||||||||||||||||||||||||||||
BSU24760___rs    251 LGLDFSNVKTEQSLAKALANKGFKIKEC    278


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.