Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03678 and BSU24670

See DNA alignment / Visit BSNT_03678 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_03678___comGG.1.22522.seq
#    -bsequence pep-align/BSU24670___comGG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03678___comGG-BSU24670___comGG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03678___comGG-BSU24670___comGG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03678___comGG
# 2: BSU24670___comGG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:     121/124 (97.6%)
# Similarity:   122/124 (98.4%)
# Gaps:           0/124 ( 0.0%)
# Score: 612.0
# 
#
#=======================================

BSNT_03678___      1 MYRTRGFIYPAVLFVSALVLLIVNFAAAQYISRCMFEKETKELYIGENLL     50
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU24670___co      1 MYRTRGFIYPAVLFVSALVLLIVNFVAAQYISRCMFEKETKELYIGENLL     50

BSNT_03678___     51 QNGVLLSIRHVLEERKGQEGTQQFPYGRVSYYIHDTSIKEQKEINLRVST    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU24670___co     51 QNGVLLSIRHVLEERKGQEGTQQFLYGRVSYYIHDTSIKEQKEINLRVST    100

BSNT_03678___    101 ESGTERTAQIVFDQKQKKLLRWTE    124
                     :|||||||||||||||||||||||
BSU24670___co    101 DSGTERTAQIVFDQKQKKLLRWTE    124


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.