Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03617 and BSU24260

See DNA alignment / Visit BSNT_03617 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_03617.1.22522.seq
#    -bsequence pep-align/BSU24260___yqxC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03617-BSU24260___yqxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03617-BSU24260___yqxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03617
# 2: BSU24260___yqxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     240/281 (85.4%)
# Similarity:   242/281 (86.1%)
# Gaps:          39/281 (13.9%)
# Score: 1246.0
# 
#
#=======================================

BSNT_03617         1 ---------------------------------------MDKPGEKIDRD     11
                                                            :||||||||||
BSU24260___yq      1 MTSKKERLDVLLVERGLAETREKAKRAIMAGIVYSNENRLDKPGEKIDRD     50

BSNT_03617        12 LPLTVKGNPLRYVSRGGLKLEKALKEFPVSVKDKIMIDIGSSTGGFTDCA     61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq     51 LPLTVKGNPLRYVSRGGLKLEKALKEFPVSVKDKIMIDIGSSTGGFTDCA    100

BSNT_03617        62 LQNGAKQSYAVDVGYNQLAWKLRQDERVVVMERTNFRYATPADFTKGMPE    111
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    101 LQNGAKQSYAVDVGYNQLAWKLRQDERVVVMERTNFRYATPADFTKGMPE    150

BSNT_03617       112 FATIDVSFISLRLILPVLRTLLVPGSDCMALVKPQFEAGRESVGKKGIVR    161
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    151 FATIDVSFISLRLILPVLRTLLVPGSDCMALVKPQFEAGRESVGKKGIVR    200

BSNT_03617       162 DPKVHADVLKRMISFSAAEGYICKGLSFSPITGGDGNIEFLLHLHWPGEG    211
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    201 DPKVHADVLKRMISFSAAEGYICKGLSFSPITGGDGNIEFLLHLHWPGEG    250

BSNT_03617       212 QDGQELPEEEIMRVVEEAHKTLKEKKADVPE    242
                     |:|||||||||||||||||||||||||||||
BSU24260___yq    251 QEGQELPEEEIMRVVEEAHKTLKEKKADVPE    281


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.