Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03552 and BSU23880

See DNA alignment / Visit BSNT_03552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_03552___yqzJ.1.22522.seq
#    -bsequence pep-align/BSU23880___yqzJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03552___yqzJ-BSU23880___yqzJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03552___yqzJ-BSU23880___yqzJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03552___yqzJ
# 2: BSU23880___yqzJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 98
# Identity:      94/98 (95.9%)
# Similarity:    94/98 (95.9%)
# Gaps:           3/98 ( 3.1%)
# Score: 487.0
# 
#
#=======================================

BSNT_03552___      1 MDVMTMFVESINDVLFLVDFFTIILPALTAIGIAFLLRECRVGEQWKSKR     50
                        ||||||||||||||||||||||||||||||||||||||.||||||||
BSU23880___yq      1 ---MTMFVESINDVLFLVDFFTIILPALTAIGIAFLLRECRAGEQWKSKR     47

BSNT_03552___     51 TDEHQTVFHINRTDFLIIIYHRITTWIRKVFRMNSPVNDEEDAGSLLL     98
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU23880___yq     48 TDEHQTVFHINRTDFLIIIYHRITTWIRKVFRMNSPVNDEEDAGSLLL     95


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.