Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_03502 and BSU23530

See DNA alignment / Visit BSNT_03502 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence pep-align/BSNT_03502___spoIIM.1.22522.seq
#    -bsequence pep-align/BSU23530___spoIIM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03502___spoIIM-BSU23530___spoIIM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03502___spoIIM-BSU23530___spoIIM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03502___spoIIM
# 2: BSU23530___spoIIM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity:     214/214 (100.0%)
# Similarity:   214/214 (100.0%)
# Gaps:           0/214 ( 0.0%)
# Score: 1072.0
# 
#
#=======================================

BSNT_03502___      1 MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23530___sp      1 MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDL     50

BSNT_03502___     51 YYYLSQFFGQLSDGKQASSADMFGQSIFHNAKYLGLMWILGISVIGMPII    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23530___sp     51 YYYLSQFFGQLSDGKQASSADMFGQSIFHNAKYLGLMWILGISVIGMPII    100

BSNT_03502___    101 FIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23530___sp    101 FIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGT    150

BSNT_03502___    151 CAIAFSLKLIRQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAY    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23530___sp    151 CAIAFSLKLIRQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAY    200

BSNT_03502___    201 LSPVLMEKLTSRLF    214
                     ||||||||||||||
BSU23530___sp    201 LSPVLMEKLTSRLF    214


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.