Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03473 and BSU23350

See DNA alignment / Visit BSNT_03473 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence pep-align/BSNT_03473___ypzD.1.22522.seq
#    -bsequence pep-align/BSU23350___ypzD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03473___ypzD-BSU23350___ypzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03473___ypzD-BSU23350___ypzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03473___ypzD
# 2: BSU23350___ypzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 70
# Identity:      70/70 (100.0%)
# Similarity:    70/70 (100.0%)
# Gaps:           0/70 ( 0.0%)
# Score: 359.0
# 
#
#=======================================

BSNT_03473___      1 MIDYPININNVSGNSVINVGGAFMIRPLTLSKSVFGSGGLNTGIVFENNF     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23350___yp      1 MIDYPININNVSGNSVINVGGAFMIRPLTLSKSVFGSGGLNTGIVFENNF     50

BSNT_03473___     51 VSKAKMINHQFTDQNVTKTF     70
                     ||||||||||||||||||||
BSU23350___yp     51 VSKAKMINHQFTDQNVTKTF     70


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