Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_03421 and BSU22980

See DNA alignment / Visit BSNT_03421 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence pep-align/BSNT_03421___ypbG.1.22522.seq
#    -bsequence pep-align/BSU22980___ypbG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03421___ypbG-BSU22980___ypbG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03421___ypbG-BSU22980___ypbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03421___ypbG
# 2: BSU22980___ypbG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     258/259 (99.6%)
# Similarity:   259/259 (100.0%)
# Gaps:           0/259 ( 0.0%)
# Score: 1354.0
# 
#
#=======================================

BSNT_03421___      1 MKLSVKIAGVLTVAAAAMTAKMYATAKGNHLKTHTFPLSKMKGKPPLTIF     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22980___yp      1 MKLSVKIAGVLTVAAAAMTAKMYATAKGNHLKTHTFPLSKMKGKPPLTIF     50

BSNT_03421___     51 FISDIHKRLIDQDLLEKARSHAPHLVIIGGDLAEGGVPSARIEENIKRLV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22980___yp     51 FISDIHKRLIDQDLLEKARSHAPHLVIIGGDLAEGGVPSARIEENIKRLV    100

BSNT_03421___    101 HFGVPIVFVWGNNDYEVRQHKLYSIFKAHGIITLRNESVPFSYNGHTIAI    150
                     ||||||||||||||||||||||||||||||:|||||||||||||||||||
BSU22980___yp    101 HFGVPIVFVWGNNDYEVRQHKLYSIFKAHGVITLRNESVPFSYNGHTIAI    150

BSNT_03421___    151 AGVDDIRMEMDHYEEAIKELDESQLNILVCHNPEIHEQINEDDGIDVILS    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22980___yp    151 AGVDDIRMEMDHYEEAIKELDESQLNILVCHNPEIHEQINEDDGIDVILS    200

BSNT_03421___    201 GHTHGGQIRFGKFGPYELGKTGIVKNAAYLISNGYGTTKVPLRLGAEPET    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22980___yp    201 GHTHGGQIRFGKFGPYELGKTGIVKNAAYLISNGYGTTKVPLRLGAEPET    250

BSNT_03421___    251 HIVTLCGPE    259
                     |||||||||
BSU22980___yp    251 HIVTLCGPE    259


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.