Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03400 and BSU22869

See DNA alignment / Visit BSNT_03400 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:08
# Commandline: needle
#    -asequence pep-align/BSNT_03400.1.22522.seq
#    -bsequence pep-align/BSU22869___ypzI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03400-BSU22869___ypzI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03400-BSU22869___ypzI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03400
# 2: BSU22869___ypzI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 45
# Identity:      43/45 (95.6%)
# Similarity:    43/45 (95.6%)
# Gaps:           2/45 ( 4.4%)
# Score: 219.0
# 
#
#=======================================

BSNT_03400         1 --MGKDRQEKKLKASGRVESDRDQSIHYDGATSLEQNGRFKKRKS     43
                       |||||||||||||||||||||||||||||||||||||||||||
BSU22869___yp      1 MIMGKDRQEKKLKASGRVESDRDQSIHYDGATSLEQNGRFKKRKS     45


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.