Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03335 and BSU22380

See DNA alignment / Visit BSNT_03335 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence pep-align/BSNT_03335___ypmB.1.22522.seq
#    -bsequence pep-align/BSU22380___ypmB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03335___ypmB-BSU22380___ypmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03335___ypmB-BSU22380___ypmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03335___ypmB
# 2: BSU22380___ypmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:     160/161 (99.4%)
# Similarity:   161/161 (100.0%)
# Gaps:           0/161 ( 0.0%)
# Score: 796.0
# 
#
#=======================================

BSNT_03335___      1 MRKKALIFTVIFGIIFLAVLLVSASIYKSAMAQKEEGHEAAAAEAKKETD     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22380___yp      1 MRKKALIFTVIFGIIFLAVLLVSASIYKSAMAQKEEGHEAAAAEAKKETD     50

BSNT_03335___     51 LANVDQVETFVGKEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGI    100
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
BSU22380___yp     51 LAHVDQVETFVGKEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGI    100

BSNT_03335___    101 SEDKAAKIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYSLSYVDF    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22380___yp    101 SEDKAAKIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYSLSYVDF    150

BSNT_03335___    151 TTGKILKNITP    161
                     |||||||||||
BSU22380___yp    151 TTGKILKNITP    161


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.