Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03328 and BSU22330

See DNA alignment / Visit BSNT_03328 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_03328.1.22522.seq
#    -bsequence pep-align/BSU22330___ypoC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03328-BSU22330___ypoC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03328-BSU22330___ypoC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03328
# 2: BSU22330___ypoC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 164
# Identity:     139/164 (84.8%)
# Similarity:   139/164 (84.8%)
# Gaps:          25/164 (15.2%)
# Score: 762.0
# 
#
#=======================================

BSNT_03328         1 -------------------------MKKTLQTNPVYFDFCTELQGDLPWE     25
                                              |||||||||||||||||||||||||
BSU22330___yp      1 MTQAKEVLASYEQYLRSLGQKSSSDMKKTLQTNPVYFDFCTELQGDLPWE     50

BSNT_03328        26 DSGKYVPLLFEVWDDIKASLLPVFQTRKSRCDQNEMLKGIVCLLASLHWT     75
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22330___yp     51 DSGKYVPLLFEVWDDIKASLLPVFQTRKSRCDQNEMLKGIVCLLASLHWT    100

BSNT_03328        76 AGEPVKSLDWQELREKSYPAKPINWAERVEFILLKPTQYHCFIQLDELIT    125
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22330___yp    101 AGEPVKSLDWQELREKSYPAKPINWAERVEFILLKPTQYHCFIQLDELIT    150

BSNT_03328       126 EMKKHFYKYHAMNR    139
                     ||||||||||||||
BSU22330___yp    151 EMKKHFYKYHAMNR    164


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.