Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03312 and BSU22240

See DNA alignment / Visit BSNT_03312 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_03312___ypqA.1.22522.seq
#    -bsequence pep-align/BSU22240___ypqA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03312___ypqA-BSU22240___ypqA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03312___ypqA-BSU22240___ypqA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03312___ypqA
# 2: BSU22240___ypqA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:     137/139 (98.6%)
# Similarity:   138/139 (99.3%)
# Gaps:           0/139 ( 0.0%)
# Score: 701.0
# 
#
#=======================================

BSNT_03312___      1 MEFYDDKKNELQKKEEIITEAIDTLFQSSAFGNLINGFQNLINSSLKDVQ     50
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU22240___yp      1 MEFHDDKKNELQKKEEIITEAIDTLFQSSAFGNLINGFQNLINSSLKDVQ     50

BSNT_03312___     51 TTILVRERDTGLYIDITIPATFRDGEIVVDVKSRYLHVTLQEKQKHQNEA    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU22240___yp     51 TTIHVRERDTGLYIDITIPATFRDGEIVVDVKSRYLHVTLQEKQKHQNEA    100

BSNT_03312___    101 TFTSMTRTVQLPYEVRQEDMETSWNEQTMTLFFPKNKHE    139
                     |||||||||||||||||||||||||||||||||||||||
BSU22240___yp    101 TFTSMTRTVQLPYEVRQEDMETSWNEQTMTLFFPKNKHE    139


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