Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03311 and BSU22230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence pep-align/BSNT_03311___ypqE.1.22522.seq
# -bsequence pep-align/BSU22230___ypqE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03311___ypqE-BSU22230___ypqE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03311___ypqE-BSU22230___ypqE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03311___ypqE
# 2: BSU22230___ypqE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 164/185 (88.6%)
# Similarity: 165/185 (89.2%)
# Gaps: 17/185 ( 9.2%)
# Score: 820.0
#
#
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BSNT_03311___ 1 MVNEGITVEVNEKGENTLLKKLFGMGKTQEKVTEEVIYSPADGTVMDLSD 50
:|||||||||.||||||||||||||||||||||
BSU22230___yp 1 -----------------MLKKLFGMGKIQEKVTEEVIYSPADGTVMDLSD 33
BSNT_03311___ 51 VPDPVFSQKMMGEGIAVEPSSGEIVSPAEGEVIQIFHTKHAVGIRTRSGI 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp 34 VPDPVFSQKMMGEGIAVEPSSGEIVSPAEGEVIQIFHTKHAVGIRTRSGI 83
BSNT_03311___ 101 ELLIHVGLETVNMNGEGFTAHIKEGDKVKVGDPLITCDLELIKEKASSTV 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU22230___yp 84 ELLIHVGLETVNMNGEGFTAHIKEGDKVKVGDPLITCDLELIKEKASSTV 133
BSNT_03311___ 151 IPIVIMNGEAVGSMVPAGEKAARKGESKLLTIKAK 185
|||||||||||||||.|||||||||||||.|||||
BSU22230___yp 134 IPIVIMNGEAVGSMVSAGEKAARKGESKLFTIKAK 168
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