Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03086 and BSU21500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:31
# Commandline: needle
# -asequence pep-align/BSNT_03086.1.22522.seq
# -bsequence pep-align/BSU21500___uvrX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03086-BSU21500___uvrX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03086-BSU21500___uvrX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03086
# 2: BSU21500___uvrX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 416
# Identity: 131/416 (31.5%)
# Similarity: 141/416 (33.9%)
# Gaps: 272/416 (65.4%)
# Score: 662.0
#
#
#=======================================
BSNT_03086 1 MINYSQFPRKNILCVDMKSFYAFVSAVSMGLNPLTCYLAVVGNTERQGSV 50
||:|||||||||||||||||||.||||:||||||||||||||||:|||||
BSU21500___uv 1 MIDYSQFPRKNILCVDMKSFYASVSAVTMGLNPLTCYLAVVGNTDRQGSV 50
BSNT_03086 51 VLAASPALKKDFGIKTGSKLFEKPENPRIHIVNPQMKLFIRVSTEITKLF 100
||||||||||||||||||:|||.||:||||||||||||||||||||||||
BSU21500___uv 51 VLAASPALKKDFGIKTGSRLFEIPEDPRIHIVNPQMKLFIRVSTEITKLF 100
BSNT_03086 101 YRFVPEKCVHTFSIDESFLDAGKEDPEEMAKAIQSS------TVC----G 140
|||||||||||:|||||||||||||||||||||||| .:| |
BSU21500___uv 101 YRFVPEKCVHTYSIDESFLDAGKEDPEEMAKAIQSSMWREFGLMCTVGIG 150
BSNT_03086 141 ENLV---------------------------------------------- 144
:|::
BSU21500___uv 151 DNMLLSKLALDLESKKTKSGIARWRYEDVPNKLWKVRPLSKMWGIGGRME 200
BSNT_03086 144 -------------------------------------------------- 144
BSU21500___uv 201 RNLNRMGISTIGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIGAPLM 250
BSNT_03086 144 -------------------------------------------------- 144
BSU21500___uv 251 QGQISFGKSQILLRDYTRSEEIKAVLLEICEEVARRARTHNKVGRTISLG 300
BSNT_03086 144 -------------------------------------------------- 144
BSU21500___uv 301 IGYSKDELGGGFHRSKTIDLPTSITMDIYRCCLMLFNKFYSGKTVRSVSV 350
BSNT_03086 144 -------------------------------------------------- 144
BSU21500___uv 351 TLSNIEDDVNQQLSLFEVDNEKRRKLGFVMDGIRSKYGSKAILRAVSYTP 400
BSNT_03086 144 ---------------- 144
BSU21500___uv 401 AGTALQRAGLTGGHKS 416
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