Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03206 and BSU19660

See DNA alignment / Visit BSNT_03206 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence pep-align/BSNT_03206___yozD.1.22522.seq
#    -bsequence pep-align/BSU19660___yozD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03206___yozD-BSU19660___yozD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03206___yozD-BSU19660___yozD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03206___yozD
# 2: BSU19660___yozD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 58
# Identity:      57/58 (98.3%)
# Similarity:    58/58 (100.0%)
# Gaps:           0/58 ( 0.0%)
# Score: 292.0
# 
#
#=======================================

BSNT_03206___      1 MKEIDLVIDTEEIAEFFYRELARRGYIPSEDELFEIADITFDYLIEKCMI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19660___yo      1 MKEIDLVIDTEEIAEFFYRELARRGYIPSEDELFEIADITFDYLIEKCMI     50

BSNT_03206___     51 NEELDEDE     58
                     :|||||||
BSU19660___yo     51 DEELDEDE     58


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.