Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03130 and BSU19210

See DNA alignment / Visit BSNT_03130 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:35
# Commandline: needle
#    -asequence pep-align/BSNT_03130___yocH.1.22522.seq
#    -bsequence pep-align/BSU19210___yocH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03130___yocH-BSU19210___yocH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03130___yocH-BSU19210___yocH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03130___yocH
# 2: BSU19210___yocH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     284/287 (99.0%)
# Similarity:   286/287 (99.7%)
# Gaps:           0/287 ( 0.0%)
# Score: 1428.0
# 
#
#=======================================

BSNT_03130___      1 MKKTIMSFVAVAALSTTAFGAHASAKEITVQKGDTLWGISQKNGVNLKDL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19210___yo      1 MKKTIMSFVAVAALSTTAFGAHASAKEITVQKGDTLWGISQKNGVNLKDL     50

BSNT_03130___     51 KEWNKLTSDKIIAGEKLTISSEETTTTGQYTIKAGDTLSKIAQKFGTTVN    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19210___yo     51 KEWNKLTSDKIIAGEKLTISSEETTTTGQYTIKAGDTLSKIAQKFGTTVN    100

BSNT_03130___    101 NLKVWNNLSSDMIYAGSTLSVKGQATAANTATENAQTNAPQAAPKQEAVQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19210___yo    101 NLKVWNNLSSDMIYAGSTLSVKGQATAANTATENAQTNAPQAAPKQEAVQ    150

BSNT_03130___    151 KEQPKQEAVQQQPKQETKAEAETSVNTEEKAVQSNTNNQEASKELTVTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19210___yo    151 KEQPKQEAVQQQPKQETKAEAETSVNTEEKAVQSNTNNQEASKELTVTAT    200

BSNT_03130___    201 AYTANDGGISGVTATGIDLNKNPNAKVIAVDPNVIPLGSKVYVEGYGEAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19210___yo    201 AYTANDGGISGVTATGIDLNKNPNAKVIAVDPNVIPLGSKVYVEGYGEAT    250

BSNT_03130___    251 AGDTGGAIKGNKIDVFVPSKSDASNWGVKTVNVKILN    287
                     |.|||||||||||||||||||||||||||||:||:||
BSU19210___yo    251 AADTGGAIKGNKIDVFVPSKSDASNWGVKTVSVKVLN    287


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.