Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03123 and BSU19170
See
DNA alignment /
Visit
BSNT_03123 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:34
# Commandline: needle
# -asequence pep-align/BSNT_03123___yocD.1.22522.seq
# -bsequence pep-align/BSU19170___yocD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03123___yocD-BSU19170___yocD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03123___yocD-BSU19170___yocD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03123___yocD
# 2: BSU19170___yocD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity: 319/325 (98.2%)
# Similarity: 322/325 (99.1%)
# Gaps: 0/325 ( 0.0%)
# Score: 1672.0
#
#
#=======================================
BSNT_03123___ 1 MYASKLKKGDEIRIVSPATSMSILSNEAKIQAKTALERLGYRVTIAEHAN 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 1 MYASKLKKGDEIRIVSPATSMSILSNEAKIQAKTALERLGYRVTIAEHAN 50
BSNT_03123___ 51 ECNEFDSSSIESRVQDLHAAFFDPGVKAILTTLGGFNSNQLLRYLDYEKI 100
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU19170___yo 51 ECNEFDSSSIESRVHDLHAAFFDPGVKAILTTLGGFNSNQLLRYLDYEKI 100
BSNT_03123___ 101 KRHPKILCGYSDITALCNAIYQKTGLVTYSGPFFSTFAMKKGLDYTQEYF 150
||||||||||||||||||||||||||||||||.|||||||||||||:|||
BSU19170___yo 101 KRHPKILCGYSDITALCNAIYQKTGLVTYSGPHFSTFAMKKGLDYTEEYF 150
BSNT_03123___ 151 LSCCASDDPFEILPSSEWSDDRWFLDQENRRFYPNNGPVVIQEGYAEGTL 200
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU19170___yo 151 LSCCASDDPFEIHPSSEWSDDRWFLDQENRRFYPNNGPVVIQEGYAEGTL 200
BSNT_03123___ 201 IGGNLCTLNLLQGTEYFPETEHTILLIEDDYMSDIHMFDRDLQSLIHLPA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19170___yo 201 IGGNLCTLNLLQGTEYFPETEHTILLIEDDYMSDIHMFDRDLQSLIHLPA 250
BSNT_03123___ 251 FSHVKAILIGRFQKASNVSMDLVKAMIETKKELSGIPVIANINAGHTSPI 300
|||||||||||||||||||:|||||||||||||||||:||||||||||||
BSU19170___yo 251 FSHVKAILIGRFQKASNVSIDLVKAMIETKKELSGIPIIANINAGHTSPI 300
BSNT_03123___ 301 ATFPIGGTCRIEAISGTSRIWIDKH 325
|||||||||||||||||||||||||
BSU19170___yo 301 ATFPIGGTCRIEAISGTSRIWIDKH 325
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.