Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03108 and BSU19090

See DNA alignment / Visit BSNT_03108 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:34
# Commandline: needle
#    -asequence pep-align/BSNT_03108___yobU.1.22522.seq
#    -bsequence pep-align/BSU19090___yobU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03108___yobU-BSU19090___yobU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03108___yobU-BSU19090___yobU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03108___yobU
# 2: BSU19090___yobU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     157/160 (98.1%)
# Similarity:   158/160 (98.8%)
# Gaps:           0/160 ( 0.0%)
# Score: 829.0
# 
#
#=======================================

BSNT_03108___      1 MGFSHITHLDRKRFAGLSQRTSNALEMTEERRIPALWDQFWKQDMSALLS     50
                     ||||||||||.||||||||||||||||||||||||||||.||||||||||
BSU19090___yo      1 MGFSHITHLDLKRFAGLSQRTSNALEMTEERRIPALWDQLWKQDMSALLS     50

BSNT_03108___     51 QAEKDKSIIALYSNYEQETNGFYTFSVGTFQEYDDILPGPYENIDLPASA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU19090___yo     51 QAEKDKSIIALYSNYEQETNGFYTFSVGTFQEYDDILPGPYENIDLPASA    100

BSNT_03108___    101 YAVFTSRIGPIEEIVLETWKEIWTWDKRHLRTFTGDFEMYDQSAAVPQRA    150
                     ||||||||||||||||||||||||||||||||||||||||||:|||||||
BSU19090___yo    101 YAVFTSRIGPIEEIVLETWKEIWTWDKRHLRTFTGDFEMYDQNAAVPQRA    150

BSNT_03108___    151 QVNIYVAIKK    160
                     ||||||||||
BSU19090___yo    151 QVNIYVAIKK    160


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