Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01364 and BSU19030

See DNA alignment / Visit BSNT_01364 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:14
# Commandline: needle
#    -asequence pep-align/BSNT_01364.1.22522.seq
#    -bsequence pep-align/BSU19030___yobO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01364-BSU19030___yobO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01364-BSU19030___yobO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01364
# 2: BSU19030___yobO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity:     308/846 (36.4%)
# Similarity:   432/846 (51.1%)
# Gaps:         109/846 (12.9%)
# Score: 1305.0
# 
#
#=======================================

BSNT_01364         1 --------------------------------MENYTTFLGLYKPESTES     18
                                                     |:|:      .|...|: 
BSU19030___yo      1 MVHFKNCPDPSLNANSQSHPEFSSELEHIKTRMQNF------IKHSVTD-     43

BSNT_01364        19 IEIDSKLAENFETIDSKIGIALSNGITTFENLNERL--KMYENRFEYLDE     66
                             :|.|..|::  :.....:|:.  |.|||  :.|....:...|
BSU19030___yo     44 --------QNIEVTDAR--VTAEGEVTSL--LKERLDKEYYRLLSKITRE     81

BSNT_01364        67 RNVMDYGAKGDGVTDDTQAFHDAMAEGGYLIKVPAGVFRVSGLLVPSNTM    116
                     .||.|:||..|| .|:|:||..|:..|...:.||||.:.|.|:.:||.|.
BSU19030___yo     82 VNVADFGAVPDG-RDNTEAFRKAIGNGRVKVHVPAGEYLVQGIKLPSWTT    130

BSNT_01364       117 LVGAGKKRTIIKLLDDTPVGHSVLTNSDHTNGNENIYIGHLTLDWNKDTR    166
                     :||.||..|:|||.:|||....|:||.|:.|||.||::..::|||| .:|
BSU19030___yo    131 IVGQGKGITVIKLHEDTPAHEWVITNDDYQNGNRNIFVQGMSLDWN-PSR    179

BSNT_01364       167 PAGWKIPKGPTSSCLLFANVDYSFVEHVFAKNAGLHGFDATSPNYNRHGE    216
                     ..|.:.|.|..||||.||.|:|.:::.|.|.||||||.|.|||.|:...:
BSU19030___yo    180 QCGVRNPGGQFSSCLTFAKVEYGWIKDVEAINAGLHGIDITSPTYDHLPD    229

BSNT_01364       217 NDDPTFYQPGGCNFVTFSYCEATGSGDDNFTCHFGKHTTFSHCLSYHPMG    266
                     .|    :...|..::....|...|||||..|.|:.::...|:|.|.:|.|
BSU19030___yo    230 TD----WTKDGSRYIWIDNCVTYGSGDDGITTHYSEYIFISNCHSGNPRG    275

BSNT_01364       267 LN--DGSSNTNCFEIDDGSQDVMVDSCIAIGGVRGFEIKAHDYAPAAKRV    314
                     ..  :|.||:|..||||||:.|.:.:....|.:||.|:|||:..||::.|
BSU19030___yo    276 TEFAEGVSNSNGIEIDDGSRHVWLLNNFTSGNIRGVEVKAHELWPASQNV    325

BSNT_01364       315 QLVNCRAYENAISFCIRHIGHHTASDPQSASAHDVQLANCIAYNPKPSDL    364
                     .::...:|.:..:|.:||||||..:||:|.:|:||.|.:|.|..|..:.|
BSU19030___yo    326 HIIGHISYRDVRAFDLRHIGHHQITDPESTTAYDVTLIDCSAVEPVFNSL    375

BSNT_01364       365 YKGAGPNALQISGYDGVNVVNFHAICDDSSINYKGNSVVSVYYKGRLINL    414
                     |....|.||.||.|..|||..|.|| .|...:||.|.||::.|:.:.|.:
BSU19030___yo    376 YDAVTPRALVISAYKNVNVSGFTAI-GDPDYDYKENPVVALQYRSQNITI    424

BSNT_01364       415 KNITIRGFKTADNDLYIVGGDNSVGKVMIDGVTLIDSAEKGVVFGSGMYE    464
                     ..|.|||||.|..|:.:.||.|....:.|....:..||.||:..|.|:|.
BSU19030___yo    425 NGIKIRGFKKAGVDINLSGGSNKTDYIKISNFDIYKSAPKGISIGGGLYN    474

BSNT_01364       465 SVVSNVWGQRSPKNNSGTVGIFSVDPDLNVSNCDFSGYETDFKI------    508
                     ..:.|  |.....|  |||.|.|.:....:......||.....|      
BSU19030___yo    475 VNILN--GTMITDN--GTVAIQSPNNQATILGVQSEGYSVAASIKGQTYQ    520

BSNT_01364       509 -------GGV---VTPYFLFKHKGSGIIGSRDSHATGNNNFVAGSVRSRA    548
                            ||:   .|..|......:.|.|:.|..|.|..|.|..|....:
BSU19030___yo    521 QVPINLKGGIQLATTSGFAVNQTSAVIAGTGDITARGERNAVISSSGGSS    570

BSNT_01364       549 TGAAQSSVIASYNT-INPNSDSVALGWASGSTPSSSNRKIE--FHAKDG-    594
                     |..:::.:.:|.|. |..|.       ||.:..||.|..:|  :....| 
BSU19030___yo    571 TEGSRALIASSNNAHIRGNQ-------ASRTILSSENIILEEPYTVAGGH    613

BSNT_01364       595 --------TIKASGSIKS--SQTFSDYAEYFESLSGEKIPAGTLVTLEGD    634
                             :::.:|:...  |.:...|.|||||.:|:.|..||:|||.|:
BSU19030___yo    614 QSIKWLLDSVRGNGTFAGAISSSLGGYGEYFESSTGQLIHTGTIVTLRGE    663

BSNT_01364       635 KIRPAKKGDFMLGVISETAGVILGESSFHWSGRYLKNDFGGYIYEKQKD-    683
                     ||.||..||:||||||||:..|.|.|||.|.||||.|:|||:|||...| 
BSU19030___yo    664 KIVPANVGDYMLGVISETSAFISGASSFVWQGRYLTNEFGGFIYETVTDE    713

BSNT_01364       684 ANGQIVMAPMENPDYKP--DKNYASREERDEWNVVGLVGQVYVRCDSTVE    731
                     .:|:::..|.:||||..  :.||.||..||||:|||||||.|||.|.||.
BSU19030___yo    714 ESGELIRVPKQNPDYDTALEANYHSRAARDEWHVVGLVGQHYVRIDETVN    763

BSNT_01364       732 AGDFIQAHNNGIATKTVSPKQRWQVMRVIKEFDKSKGYGVVLVFIR    777
                     .||::.|| |||.||  :.:..|:||::...:...||||:.|..|:
BSU19030___yo    764 QGDYLTAH-NGIGTK--ATEGSWKVMKITSAYTSEKGYGIALTVIK    806


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01364 and BSU19030

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
