Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03070 and BSU18500

See DNA alignment / Visit BSNT_03070 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:31
# Commandline: needle
#    -asequence pep-align/BSNT_03070___yoxD.1.22522.seq
#    -bsequence pep-align/BSU18500___yoxD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03070___yoxD-BSU18500___yoxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03070___yoxD-BSU18500___yoxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03070___yoxD
# 2: BSU18500___yoxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     236/238 (99.2%)
# Similarity:   238/238 (100.0%)
# Gaps:           0/238 ( 0.0%)
# Score: 1165.0
# 
#
#=======================================

BSNT_03070___      1 MQSLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTAANVEKVAEEV     50
                     |||||||||||||||||||||||||||||||||||||||:||||||||||
BSU18500___yo      1 MQSLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEV     50

BSNT_03070___     51 KALGVKAAFAAADVKDAEQVNQAVAQVKEQLGDIDILINNAGISKFGGFL    100
                     |||||||||||||||||:||||||||||||||||||||||||||||||||
BSU18500___yo     51 KALGVKAAFAAADVKDADQVNQAVAQVKEQLGDIDILINNAGISKFGGFL    100

BSNT_03070___    101 DLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18500___yo    101 DLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAA    150

BSNT_03070___    151 VTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLTD    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18500___yo    151 VTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLTD    200

BSNT_03070___    201 GNPEKVMQPEDLAEYMVAQLKLDPRIFIKTAGLWSTNP    238
                     ||||||||||||||||||||||||||||||||||||||
BSU18500___yo    201 GNPEKVMQPEDLAEYMVAQLKLDPRIFIKTAGLWSTNP    238


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