Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03010 and BSU18180

See DNA alignment / Visit BSNT_03010 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:22
# Commandline: needle
#    -asequence pep-align/BSNT_03010___yngB.1.22522.seq
#    -bsequence pep-align/BSU18180___yngB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03010___yngB-BSU18180___yngB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03010___yngB-BSU18180___yngB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03010___yngB
# 2: BSU18180___yngB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     296/297 (99.7%)
# Similarity:   296/297 (99.7%)
# Gaps:           0/297 ( 0.0%)
# Score: 1494.0
# 
#
#=======================================

BSNT_03010___      1 MRKKVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAESG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18180___yn      1 MRKKVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAESG     50

BSNT_03010___     51 IEDILIITGRNKRSIEDHFDRSAELEFNLREKGKTETLKEMQQIADLANI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18180___yn     51 IEDILIITGRNKRSIEDHFDRSAELEFNLREKGKTETLKEMQQIADLANI    100

BSNT_03010___    101 HYIRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSETPALRQLMDVY    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18180___yn    101 HYIRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSETPALRQLMDVY    150

BSNT_03010___    151 DVYGTEVVGVQSVLPEDVSKYGIINTSGSQGHVYEVNDLVEKPSPEEAPS    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18180___yn    151 DVYGTEVVGVQSVLPEDVSKYGIINTSGSQGHVYEVNDLVEKPSPEEAPS    200

BSNT_03010___    201 EIAVMGRYVLNSSIFSVLKTIGRGAGNEIQLTDALREVCRKEPIHARLLE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU18180___yn    201 EIAVMGRYVLNSSIFSVLKTIGRGAGNEIQLTDALREVCRKEPIHARLLE    250

BSNT_03010___    251 GNRYDIGDKLGCFKASTEIGLMRSEMRSQLLAYLEDVIKRETKEMLR    297
                     |||||||||||||||||||||||.|||||||||||||||||||||||
BSU18180___yn    251 GNRYDIGDKLGCFKASTEIGLMRPEMRSQLLAYLEDVIKRETKEMLR    297


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.