Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02972 and BSU17970

See DNA alignment / Visit BSNT_02972 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:18
# Commandline: needle
#    -asequence pep-align/BSNT_02972___cotM.1.22522.seq
#    -bsequence pep-align/BSU17970___cotM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02972___cotM-BSU17970___cotM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02972___cotM-BSU17970___cotM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02972___cotM
# 2: BSU17970___cotM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     123/130 (94.6%)
# Similarity:   123/130 (94.6%)
# Gaps:           6/130 ( 4.6%)
# Score: 651.0
# 
#
#=======================================

BSNT_02972___      1 ------MNHSKRNDANDFDSMDEWLRQFFEDPFAWYDETLPIDLYETSQQ     44
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU17970___co      1 MWRNASMNHSKRNDANDFDSMDEWLRQFFEDPFAWYDETLPIDLYETSQQ     50

BSNT_02972___     45 YIIEADLTFLQPTQVTVTLSGCEFILTVKSSGQTFEKQMMLPFYFNDKNI     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17970___co     51 YIIEADLTFLQPTQVTVTLSGCEFILTVKSSGQTFEKQMMLPFYFNDKNI    100

BSNT_02972___     95 QAECENQILTVAVNKETEDGSSFSLQFPLS    124
                     |.||||||||||||||||||||||||||||
BSU17970___co    101 QVECENQILTVAVNKETEDGSSFSLQFPLS    130


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.