Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02955 and BSU17840

See DNA alignment / Visit BSNT_02955 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:16
# Commandline: needle
#    -asequence pep-align/BSNT_02955___fosB.1.22522.seq
#    -bsequence pep-align/BSU17840___yndN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02955___fosB-BSU17840___yndN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02955___fosB-BSU17840___yndN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02955___fosB
# 2: BSU17840___yndN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     136/144 (94.4%)
# Similarity:   137/144 (95.1%)
# Gaps:           5/144 ( 3.5%)
# Score: 726.0
# 
#
#=======================================

BSNT_02955___      1 MEIKGINHLLFSVSHLDTSIDFYQKVFDAKLLVKGRTTAYFDMNGIWLAL     50
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU17840___yn      1 MEIKGINHLLFSVSHLDTSIDFYQKVFGAKLLVKGRTTAYFDMNGIWLAL     50

BSNT_02955___     51 NEEPDIPRNDIKLSYTHIAFTIEDHEFEEVSAKLKRLHVNILPGRERDER    100
                     |||||||||||||||||||||||||||||:||||||||||||||||||||
BSU17840___yn     51 NEEPDIPRNDIKLSYTHIAFTIEDHEFEEMSAKLKRLHVNILPGRERDER    100

BSNT_02955___    101 DRKSIYFTDPDGHKFEFHTGTLQDRLRYYKQEKTHMHFL-----    139
                     ||||||||||||||||||||||||||||||||||||||.     
BSU17840___yn    101 DRKSIYFTDPDGHKFEFHTGTLQDRLRYYKQEKTHMHFYDETAF    144


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.