Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02952 and BSU17820

See DNA alignment / Visit BSNT_02952 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:16
# Commandline: needle
#    -asequence pep-align/BSNT_02952___yndL.1.22522.seq
#    -bsequence pep-align/BSU17820___yndL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02952___yndL-BSU17820___yndL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02952___yndL-BSU17820___yndL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02952___yndL
# 2: BSU17820___yndL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     247/252 (98.0%)
# Similarity:   249/252 (98.8%)
# Gaps:           0/252 ( 0.0%)
# Score: 1264.0
# 
#
#=======================================

BSNT_02952___      1 MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLFIFMVFTPISSIY     50
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU17820___yn      1 MKPAKVSLLRRLLHSLKHVDCNIAKRFPSTIKIVKLLMIFMVFTPISSIY     50

BSNT_02952___     51 AEDIYQNFEELKNNEDPSDYGVVTKETGSPVLVLAIHGGGIEGGTSEVAR    100
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn     51 AEDVYQNFEELKNNEDPSDYGVVTKETGSPVLVLAIHGGGIEGGTSEVAR    100

BSNT_02952___    101 ELSKEYSMYLFEGLKSAGNSVLHITSTHFDEPRALKMTGNHEYVISLHGY    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17820___yn    101 ELSKEYSMYLFEGLKSAGNSVLHITSTHFDEPRALKMTGNHEYVISLHGY    150

BSNT_02952___    151 AEEDQQIEVGGTDRVRAADLVEKLQHAGFPAVLLNTDHPHAGVSPNNIAN    200
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU17820___yn    151 AEEDQQIEVGGTDRVRAADLVEKLQHAGFPAVLLNMDHPHAGVSPNNIAN    200

BSNT_02952___    201 KSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYKFTEVMFRFLKY    250
                     ||||||||||||||||||||||||||||||||||||||:||||||||||.
BSU17820___yn    201 KSKTGLSIQIEMSTGFRKSLFGIFSLKSRAVTQNERFYEFTEVMFRFLKN    250

BSNT_02952___    251 SY    252
                     ||
BSU17820___yn    251 SY    252


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.