Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02939 and BSU17750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence pep-align/BSNT_02939.1.22522.seq
# -bsequence pep-align/BSU17750___yndD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02939-BSU17750___yndD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02939-BSU17750___yndD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02939
# 2: BSU17750___yndD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 527
# Identity: 271/527 (51.4%)
# Similarity: 283/527 (53.7%)
# Gaps: 232/527 (44.0%)
# Score: 1329.5
#
#
#=======================================
BSNT_02939 0 -------------------------------------------------- 0
BSU17750___yn 1 MMRWRNNQYKTQKQHKSDYSTAEKQDQDVLTGNIGYDLEHVKRKIGHNGD 50
BSNT_02939 0 -------------------------------------------------- 0
BSU17750___yn 51 VHFRELEITQLHVKAALIFVEGLSDQDLINKGLSVLVMNQPNQVSDEISQ 100
BSNT_02939 1 -----------------------------------MGSTALLIDGIPQAF 15
|||||||||||||||
BSU17750___yn 101 SGKGILTSKQIKNQIVSIGDVIDSEKISDIVLNVFMGSTALLIDGIPQAF 150
BSNT_02939 16 LLGTVKKQNRSIKEPLSEALVRGPRTGFTEELSTNTALLRQQGKNDQLTL 65
||||||||||||:|||||||||||||||||||||||||||||||||||||
BSU17750___yn 151 LLGTVKKQNRSIEEPLSEALVRGPRTGFTEELSTNTALLRQQGKNDQLTL 200
BSNT_02939 66 QRFEVGTRLKKDLIIAYMNDIADPKVVEEVRKRVRGIEIDHLPESGYVEQ 115
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17750___yn 201 QRFEVGTRLKKDLIIAYMNDIADPKVVEEVRKRVRGIEIDHLPESGYVEQ 250
BSNT_02939 116 LIEDNYLSPFPQVQSTERPDRVISELMEGRVAILLDGTPFALIVPVTFSM 165
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU17750___yn 251 LIEDNYLSPFPQVQSTERPDRVISGLMEGRVAILLDGTPFALIVPVTFSM 300
BSNT_02939 166 MLQSPEDYYERWFPSSLIRLLRFIAAMITLFAPALYISFISFHPGLIPTK 215
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17750___yn 301 MLQSPEDYYERWFPSSLIRLLRFIAAMITLFAPALYISFISFHPGLIPTK 350
BSNT_02939 216 LAISISGTRQGVPFPSLIEALFMEVAIEILREAGLRLPKPIGPAIGIVGG 265
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17750___yn 351 LAISISGTRQGVPFPSLIEALFMEVAIEILREAGLRLPKPIGPAIGIVGG 400
BSNT_02939 266 LIIGKQLCRRGL------------SVQSWSLLLRSQQFLHLPSRIIAQV- 302
||||:...:.|: ::.|::: .|..:.|..::
BSU17750___yn 401 LIIGEAAVQAGIVSPIMVIVVALTAISSFAI-------PHYSTGIALRML 443
BSNT_02939 302 -------------------------------------------------- 302
BSU17750___yn 444 RFGAMFCAAVFGLFGVIMYYLLLSSHVVKLKSFGVPYASPAVPYHLKDWK 493
BSNT_02939 302 --------------------------- 302
BSU17750___yn 494 DFVIRMPLLVMKRRPKMMNTDNTKRVK 520
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