Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02922 and BSU17690

See DNA alignment / Visit BSNT_02922 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:14
# Commandline: needle
#    -asequence pep-align/BSNT_02922___yncM.1.22522.seq
#    -bsequence pep-align/BSU17690___yncM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02922___yncM-BSU17690___yncM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02922___yncM-BSU17690___yncM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02922___yncM
# 2: BSU17690___yncM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     230/250 (92.0%)
# Similarity:   235/250 (94.0%)
# Gaps:          11/250 ( 4.4%)
# Score: 1164.0
# 
#
#=======================================

BSNT_02922___      1 ----------MVKKVLIAGAVGTAVLFGTLSSGIPGLPAADAQVAKAASQ     40
                               :||||||||||||||||||||||||||||||||||||||:
BSU17690___yn      1 MAKPLSKGGILVKKVLIAGAVGTAVLFGTLSSGIPGLPAADAQVAKAASE     50

BSNT_02922___     41 LPKGIGGRAYLNSTGAVFTAKINLPDTVK-YDTVSTPYIYSGFRATSGTE     89
                     ||.|||||.|||||||||||||.||:||| .|:|||||||||||||||||
BSU17690___yn     51 LPNGIGGRVYLNSTGAVFTAKIVLPETVKNNDSVSTPYIYSGFRATSGTE    100

BSNT_02922___     90 ADIGLQYSKQYNVWKPLMKVGSKNEETYIEGKDKFTYNKGFRPGSTVQMT    139
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17690___yn    101 ADIGLQYSKQYNVWKPLMKVGSKNEETYIEGKDKFTYNKGFRPGSTVQMT    150

BSNT_02922___    140 IHKNLSGNTRMTLWGTNNDGYTGRIITEIQGTNIGTISKWKTLATAAVSY    189
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
BSU17690___yn    151 IYKNLSGNTRMTLWGTNNDGYTGRIITEIQGTNIGTISKWKTLATAAVSY    200

BSNT_02922___    190 ESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVAGNNVTISVNK    239
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17690___yn    201 ESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVAGNNVTISVNK    250


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