Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02879 and BSU17500
See
DNA alignment /
Visit
BSNT_02879 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:11
# Commandline: needle
# -asequence pep-align/BSNT_02879.1.22522.seq
# -bsequence pep-align/BSU17500___ynaB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02879-BSU17500___ynaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02879-BSU17500___ynaB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02879
# 2: BSU17500___ynaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 132/177 (74.6%)
# Similarity: 141/177 (79.7%)
# Gaps: 33/177 (18.6%)
# Score: 719.0
#
#
#=======================================
BSNT_02879 1 MEEGKLVHMTLDGIKKAVTKYGTFPVFHHGGYVLEDATFHFKNPATPQEI 50
:||||||||:||:||||
BSU17500___yn 1 ---------------------------------MEDATFHFKDPASPQEI 17
BSNT_02879 51 SCLEKKLGVTFPNDFKEFLLQHNGMEMFDGIEILSLEGIVEYNEVQDFPE 100
|.:|:|||||||||:||||||||||||||||||||||||:||||||||||
BSU17500___yn 18 SDIEQKLGVTFPNDYKEFLLQHNGMEMFDGIEILSLEGIIEYNEVQDFPE 67
BSNT_02879 101 GYLLIGYHFDGRYVIDTNKSKKGLGYMLYLDSIDDIEDAINLNSNFEIWF 150
||:||||||||||||||||||.||||||||||||||||||||:|||||||
BSU17500___yn 68 GYVLIGYHFDGRYVIDTNKSKNGLGYMLYLDSIDDIEDAINLDSNFEIWF 117
BSNT_02879 151 DMLVSSNGTKYWEVNPNLQEYYKLVSE 177
|||||.|||||||||||||||||||||
BSU17500___yn 118 DMLVSLNGTKYWEVNPNLQEYYKLVSE 144
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.