Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02727 and BSU16800

See DNA alignment / Visit BSNT_02727 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:02
# Commandline: needle
#    -asequence pep-align/BSNT_02727___spoIIIE.1.22522.seq
#    -bsequence pep-align/BSU16800___spoIIIE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02727___spoIIIE-BSU16800___spoIIIE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02727___spoIIIE-BSU16800___spoIIIE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02727___spoIIIE
# 2: BSU16800___spoIIIE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 789
# Identity:     783/789 (99.2%)
# Similarity:   785/789 (99.5%)
# Gaps:           2/789 ( 0.3%)
# Score: 3933.0
# 
#
#=======================================

BSNT_02727___      1 --MAKKKRKSRKKQAKQLNIKYELNGLLCIAISIIAILQLGVVGQTFIYL     48
                       :|||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp      1 MSVAKKKRKSRKKQAKQLNIKYELNGLLCIAISIIAILQLGVVGQTFIYL     50

BSNT_02727___     49 FRFFAGEWFILCLLGLLVLGVSLFWKKKTPSLLTRRKAGLYCIIASILLL     98
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp     51 FRFFAGEWFILCLLGLLVLGVSLFWKKKTPSLLTRRKAGLYCIIASILLL    100

BSNT_02727___     99 SHVQLFKNLTHKGSIESASVVRNTWELFLMDMNGSSASPDLGGGMIGALL    148
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    101 SHVQLFKNLTHKGSIESASVVRNTWELFLMDMNGSSASPDLGGGMIGALL    150

BSNT_02727___    149 FATSHFLFASTGSQIMAIVMILIGMILVTGRSLQETLKKWMSPIGRFIKE    198
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    151 FAASHFLFASTGSQIMAIVMILIGMILVTGRSLQETLKKWMSPIGRFIKE    200

BSNT_02727___    199 QWLAFIDDMKSFKSNIQSSKKTKAPSKKQKPARKKQQMEPEPPDEEGDYE    248
                     |||||||||||||||:||||||||||||||||||||||||||||||||||
BSU16800___sp    201 QWLAFIDDMKSFKSNMQSSKKTKAPSKKQKPARKKQQMEPEPPDEEGDYE    250

BSNT_02727___    249 TVSPLIHSEPIISSFSDRNEEEESPVIEKRAEPVSKPLQDIQPETGDQET    298
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    251 TVSPLIHSEPIISSFSDRNEEEESPVIEKRAEPVSKPLQDIQPETGDQET    300

BSNT_02727___    299 VSAPPMTFTELENKDYEMPSLDLLADPKHTGQQADKKNIYENARKLERTF    348
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    301 VSAPPMTFTELENKDYEMPSLDLLADPKHTGQQADKKNIYENARKLERTF    350

BSNT_02727___    349 QSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNLSDDLALALAAKDI    398
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    351 QSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNLSDDLALALAAKDI    400

BSNT_02727___    399 RIEAPIPGKSAIGIEVPNAEVAMVSLKEVLESKLNDRPDAKLLIGLGRNI    448
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    401 RIEAPIPGKSAIGIEVPNAEVAMVSLKEVLESKLNDRPDAKLLIGLGRNI    450

BSNT_02727___    449 SGEAVLAELNKMPHLLVAGATGSGKSVCVNGIITSILMRAKPHEVKMMMI    498
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    451 SGEAVLAELNKMPHLLVAGATGSGKSVCVNGIITSILMRAKPHEVKMMMI    500

BSNT_02727___    499 DPKMVELNVYNGIPHLLAPVVTDPKKASQALKKVVNEMERRYELFSHTGT    548
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    501 DPKMVELNVYNGIPHLLAPVVTDPKKASQALKKVVNEMERRYELFSHTGT    550

BSNT_02727___    549 RNIEGYNDYINRANNEEGAKQPELPYIVVIVDELADLMMVASSDVEDSIT    598
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU16800___sp    551 RNIEGYNDYIKRANNEEGAKQPELPYIVVIVDELADLMMVASSDVEDSIT    600

BSNT_02727___    599 RLSQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFSVSSQTDSRTI    648
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    601 RLSQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFSVSSQTDSRTI    650

BSNT_02727___    649 LDMGGAEKLLGRGDMLFLPVGANKPVRVQGAFLSDDEVEKVVDHVITQQK    698
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    651 LDMGGAEKLLGRGDMLFLPVGANKPVRVQGAFLSDDEVEKVVDHVITQQK    700

BSNT_02727___    699 AQYQEEMIPEETTETHSEVTDELYDEAVELIVGMQTASVSMLQRRFRIGY    748
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16800___sp    701 AQYQEEMIPEETTETHSEVTDELYDEAVELIVGMQTASVSMLQRRFRIGY    750

BSNT_02727___    749 TRAARLIDAMEERGVVGPYEGSKPREVLLSKEKYDELSS    787
                     |||||||||||||||||||||||||||||||||||||||
BSU16800___sp    751 TRAARLIDAMEERGVVGPYEGSKPREVLLSKEKYDELSS    789


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02727 and BSU16800

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
