Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02682 and BSU16460

See DNA alignment / Visit BSNT_02682 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:53
# Commandline: needle
#    -asequence pep-align/BSNT_02682___cheD.1.22522.seq
#    -bsequence pep-align/BSU16460___cheD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02682___cheD-BSU16460___cheD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02682___cheD-BSU16460___cheD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02682___cheD
# 2: BSU16460___cheD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     166/166 (100.0%)
# Similarity:   166/166 (100.0%)
# Gaps:           0/166 ( 0.0%)
# Score: 828.0
# 
#
#=======================================

BSNT_02682___      1 MSTTEAVVIKVGIADVKIARFPDTIRTSGLGSCVGLVLYDKEKQTAGLVH     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16460___ch      1 MSTTEAVVIKVGIADVKIARFPDTIRTSGLGSCVGLVLYDKEKQTAGLVH     50

BSNT_02682___     51 VMLPDSTLSKTAELNRAKYADTAVQTTIDMLIEAGCRKFALKAKLAGGSE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16460___ch     51 VMLPDSTLSKTAELNRAKYADTAVQTTIDMLIEAGCRKFALKAKLAGGSE    100

BSNT_02682___    101 MFKFKSTNDLMKIGPRNVLAIKEQLSLFNIPIISEDTGGSSGRTIEFEPK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16460___ch    101 MFKFKSTNDLMKIGPRNVLAIKEQLSLFNIPIISEDTGGSSGRTIEFEPK    150

BSNT_02682___    151 SCMLHIRTVKQGEKTI    166
                     ||||||||||||||||
BSU16460___ch    151 SCMLHIRTVKQGEKTI    166


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