Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02563 and BSU15560

See DNA alignment / Visit BSNT_02563 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:35
# Commandline: needle
#    -asequence pep-align/BSNT_02563___pyrE.1.22522.seq
#    -bsequence pep-align/BSU15560___pyrE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02563___pyrE-BSU15560___pyrE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02563___pyrE-BSU15560___pyrE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02563___pyrE
# 2: BSU15560___pyrE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity:     205/216 (94.9%)
# Similarity:   208/216 (96.3%)
# Gaps:           6/216 ( 2.8%)
# Score: 1068.0
# 
#
#=======================================

BSNT_02563___      1 ------MKQIIAKHLLDIQAVFLRPNEPFTWASGILSPIYCDNRLTLSFP     44
                           :|||||||||||||||||||||||||||||||||||||||||||
BSU15560___py      1 MGGNQILKQIIAKHLLDIQAVFLRPNEPFTWASGILSPIYCDNRLTLSFP     50

BSNT_02563___     45 EVRNDVASGISKLVKEHFPEAEMIAGTATAGIPHAALAADRLNLPMCYVR     94
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU15560___py     51 EVRNDVASGISKLVKEHFPEAEMIAGTATAGIPHAALAADHLNLPMCYVR    100

BSNT_02563___     95 SKPKTHGKGNQIEGAVQEGQKTVVIEDLISTGGSVLEACAALQAAGCEVL    144
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU15560___py    101 SKPKAHGKGNQIEGAVQEGQKTVVIEDLISTGGSVLEACAALQAAGCEVL    150

BSNT_02563___    145 GVVSIFTYGLPKAEEAFAKAELPYYSLTDYDTLTEVALENGNIHSNDLKK    194
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
BSU15560___py    151 GVVSIFTYGLPKAEEAFAKAELPYYSLTDYDTLTEVALENGNIHSDDLKK    200

BSNT_02563___    195 LQTWKQNPESKDWFKK    210
                     |||||:||||||||||
BSU15560___py    201 LQTWKRNPESKDWFKK    216


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