Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02562 and BSU15550

See DNA alignment / Visit BSNT_02562 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:35
# Commandline: needle
#    -asequence pep-align/BSNT_02562___pyrF.1.22522.seq
#    -bsequence pep-align/BSU15550___pyrF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02562___pyrF-BSU15550___pyrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02562___pyrF-BSU15550___pyrF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02562___pyrF
# 2: BSU15550___pyrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     238/239 (99.6%)
# Similarity:   239/239 (100.0%)
# Gaps:           0/239 ( 0.0%)
# Score: 1182.0
# 
#
#=======================================

BSNT_02562___      1 MKNNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15550___py      1 MKNNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQL     50

BSNT_02562___     51 KERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAAL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15550___py     51 KERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAAL    100

BSNT_02562___    101 EGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKK    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BSU15550___py    101 EGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQ    150

BSNT_02562___    151 AEESGLDGVVCSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15550___py    151 AEESGLDGVVCSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATP    200

BSNT_02562___    201 AIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEGIKS    239
                     |||||||||||||||||||||||||||||||||||||||
BSU15550___py    201 AIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEGIKS    239


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.