Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02552 and BSU15460

See DNA alignment / Visit BSNT_02552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:32
# Commandline: needle
#    -asequence pep-align/BSNT_02552___ylyB.1.22522.seq
#    -bsequence pep-align/BSU15460___rluD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02552___ylyB-BSU15460___rluD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02552___ylyB-BSU15460___rluD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02552___ylyB
# 2: BSU15460___rluD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     300/303 (99.0%)
# Similarity:   303/303 (100.0%)
# Gaps:           0/303 ( 0.0%)
# Score: 1580.0
# 
#
#=======================================

BSNT_02552___      1 MNQIDITASEEQKSERIDKFLASSENDWSRTQVQQWVKDGQVVVNGSAVK     50
                     |||||||||||||||||||||||:||||||||||||||||||||||||||
BSU15460___rl      1 MNQIDITASEEQKSERIDKFLASTENDWSRTQVQQWVKDGQVVVNGSAVK     50

BSNT_02552___     51 ANYKIQPGDQVTVTVPEPEALDVLAEPMDLDIYYEDQDVLVVNKPRGMVV    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15460___rl     51 ANYKIQPGDQVTVTVPEPEALDVLAEPMDLDIYYEDQDVLVVNKPRGMVV    100

BSNT_02552___    101 HPAPGHLTGTLVNGLMAHCTDLSGINGVMRPGIVHRIDKDTSGLLMVAKN    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15460___rl    101 HPAPGHLTGTLVNGLMAHCTDLSGINGVMRPGIVHRIDKDTSGLLMVAKN    150

BSNT_02552___    151 DMAHESLVNQLVNKTVTRKYTAVVHGLISHDDGTIDAPIGRDKKDRQSMT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15460___rl    151 DMAHESLVNQLVNKTVTRKYTAVVHGLISHDDGTIDAPIGRDKKDRQSMT    200

BSNT_02552___    201 VTRDGKSAVTHFHVLERFQDFTLVECQLETGRTHQIRVHMRYIGFPLAGD    250
                     ||||||:|||||||||||||||||||||||||||||||||:|||||||||
BSU15460___rl    201 VTRDGKNAVTHFHVLERFQDFTLVECQLETGRTHQIRVHMKYIGFPLAGD    250

BSNT_02552___    251 PKYGPRKTIDFNGQALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENLR    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15460___rl    251 PKYGPRKTIDFNGQALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENLR    300

BSNT_02552___    301 KNG    303
                     |||
BSU15460___rl    301 KNG    303


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.