Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02533 and BSU15340

See DNA alignment / Visit BSNT_02533 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:30
# Commandline: needle
#    -asequence pep-align/BSNT_02533___ylmA.1.22522.seq
#    -bsequence pep-align/BSU15340___ylmA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02533___ylmA-BSU15340___ylmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02533___ylmA-BSU15340___ylmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02533___ylmA
# 2: BSU15340___ylmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     262/264 (99.2%)
# Similarity:   264/264 (100.0%)
# Gaps:           0/264 ( 0.0%)
# Score: 1345.0
# 
#
#=======================================

BSNT_02533___      1 MILQLDNVSLKRNGKWILRDIHWKVEEKENWVLYGLNGAGKTALLNMLCS     50
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
BSU15340___yl      1 MILQLDNVSLKRNGKWILKDIHWKVEEKENWVLYGLNGAGKTALLNMLCS     50

BSNT_02533___     51 YYFPTSGEMQVLGHEFGKTELGEKLRRKIGLVSAALQQKLYPADSAFEIA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15340___yl     51 YYFPTSGEMQVLGHEFGKTELGEKLRRKIGLVSAALQQKLYPADSAFEIA    100

BSNT_02533___    101 LSGAYASIGLYETPSKETREKAIGLLEDLGAIEYADRRYETLSQGEKQRA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15340___yl    101 LSGAYASIGLYETPSKETREKAIGLLEDLGAIEYADRRYETLSQGEKQRA    150

BSNT_02533___    151 LIARALMADPELLILDEPVTGLDFIAREKLLDTITYIANKENAPSILYVT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15340___yl    151 LIARALMADPELLILDEPVTGLDFIAREKLLDTITYIANKENAPSILYVT    200

BSNT_02533___    201 HHAEEILPVFDKALLLKQGEVFGSGEIKEMLTDQVLSAFFDTPIHVLWNQ    250
                     ||||||||||||||||||||||||||||||||||:|||||||||||||||
BSU15340___yl    201 HHAEEILPVFDKALLLKQGEVFGSGEIKEMLTDQILSAFFDTPIHVLWNQ    250

BSNT_02533___    251 DRPFLTRAEPITNA    264
                     ||||||||||||||
BSU15340___yl    251 DRPFLTRAEPITNA    264


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