Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02531 and BSU15320

See DNA alignment / Visit BSNT_02531 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:29
# Commandline: needle
#    -asequence pep-align/BSNT_02531___sigE.1.22522.seq
#    -bsequence pep-align/BSU15320___sigE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02531___sigE-BSU15320___sigE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02531___sigE-BSU15320___sigE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02531___sigE
# 2: BSU15320___sigE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     239/239 (100.0%)
# Similarity:   239/239 (100.0%)
# Gaps:           0/239 ( 0.0%)
# Score: 1196.0
# 
#
#=======================================

BSNT_02531___      1 MKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15320___si      1 MKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMK     50

BSNT_02531___     51 LPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVN    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15320___si     51 LPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVN    100

BSNT_02531___    101 TFNPEKKIKLATYASRCIENEILMYLRRNNKIRSEVSFDEPLNIDWDGNE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15320___si    101 TFNPEKKIKLATYASRCIENEILMYLRRNNKIRSEVSFDEPLNIDWDGNE    150

BSNT_02531___    151 LLLSDVLGTDDDIITKDIEANVDKKLLKKALEQLNEREKQIMELRFGLVG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15320___si    151 LLLSDVLGTDDDIITKDIEANVDKKLLKKALEQLNEREKQIMELRFGLVG    200

BSNT_02531___    201 EEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV    239
                     |||||||||||||||||||||||||||||||||||||||
BSU15320___si    201 EEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV    239


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