Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02516 and BSU15230

See DNA alignment / Visit BSNT_02516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:25
# Commandline: needle
#    -asequence pep-align/BSNT_02516___murB.1.22522.seq
#    -bsequence pep-align/BSU15230___murB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02516___murB-BSU15230___murB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02516___murB-BSU15230___murB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02516___murB
# 2: BSU15230___murB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     303/303 (100.0%)
# Similarity:   303/303 (100.0%)
# Gaps:           0/303 ( 0.0%)
# Score: 1544.0
# 
#
#=======================================

BSNT_02516___      1 MEKVIQELKEREVGKVLANEPLANHTTMKIGGPADVLVIPSSVDAVKDIM     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15230___mu      1 MEKVIQELKEREVGKVLANEPLANHTTMKIGGPADVLVIPSSVDAVKDIM     50

BSNT_02516___     51 DVIKKYDVKWTVIGRGSNLLVLDEGIRGVVIKLGAGLDHLELEGEQVTVG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15230___mu     51 DVIKKYDVKWTVIGRGSNLLVLDEGIRGVVIKLGAGLDHLELEGEQVTVG    100

BSNT_02516___    101 GGYSVVRLATSLSKKGLSGLEFAAGIPGSVGGAVYMNAGAHGSDMSEILV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15230___mu    101 GGYSVVRLATSLSKKGLSGLEFAAGIPGSVGGAVYMNAGAHGSDMSEILV    150

BSNT_02516___    151 KAHILFEDGTIEWLTNEQMDFSYRTSVLQKKRPGVCLEAVLQLEQKDKES    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15230___mu    151 KAHILFEDGTIEWLTNEQMDFSYRTSVLQKKRPGVCLEAVLQLEQKDKES    200

BSNT_02516___    201 IVQQMQSNKDYRKNTQPYSSPCAGSIFRNPLPNHAGNLVEKAGLKGYQIG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15230___mu    201 IVQQMQSNKDYRKNTQPYSSPCAGSIFRNPLPNHAGNLVEKAGLKGYQIG    250

BSNT_02516___    251 GAKISEMHGNFIVNAGGASAKDVLDLIDHVKKTIREKYEIDMHTEVEIIG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15230___mu    251 GAKISEMHGNFIVNAGGASAKDVLDLIDHVKKTIREKYEIDMHTEVEIIG    300

BSNT_02516___    301 GNR    303
                     |||
BSU15230___mu    301 GNR    303


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.