Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02498 and BSU15070

See DNA alignment / Visit BSNT_02498 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:22
# Commandline: needle
#    -asequence pep-align/BSNT_02498___ylbN.1.22522.seq
#    -bsequence pep-align/BSU15070___ylbN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02498___ylbN-BSU15070___ylbN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02498___ylbN-BSU15070___ylbN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02498___ylbN
# 2: BSU15070___ylbN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     170/172 (98.8%)
# Similarity:   172/172 (100.0%)
# Gaps:           0/172 ( 0.0%)
# Score: 886.0
# 
#
#=======================================

BSNT_02498___      1 MKWTIYQLHQMPKQSFEFDETVELNELTKLNSDIRRISPVRVKGRADIKS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15070___yl      1 MKWTIYQLHQMPKQSFEFDETVELNELTKLNSDIRRISPVRVKGRADIKS     50

BSNT_02498___     51 KQVSFDFTISGEMILPCSRTLVDVPYPFEISTKELFIFHHTDDIEDDDVH    100
                     |||||||||||||:||||||||||||||||||||||||||||||||||||
BSU15070___yl     51 KQVSFDFTISGEMLLPCSRTLVDVPYPFEISTKELFIFHHTDDIEDDDVH    100

BSNT_02498___    101 IVEDDTIDLTPIVKEEILLEIPMQIFCESEQEKGAAPQEGKDWQVISEED    150
                     ||||||||:|||||||||||||||||||||||||||||||||||||||||
BSU15070___yl    101 IVEDDTIDITPIVKEEILLEIPMQIFCESEQEKGAAPQEGKDWQVISEED    150

BSNT_02498___    151 KKNQVDPRLAALEKLLKQDDES    172
                     ||||||||||||||||||||||
BSU15070___yl    151 KKNQVDPRLAALEKLLKQDDES    172


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.