Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02482 and BSU14950

See DNA alignment / Visit BSNT_02482 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:20
# Commandline: needle
#    -asequence pep-align/BSNT_02482___ylbB.1.22522.seq
#    -bsequence pep-align/BSU14950___ylbB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02482___ylbB-BSU14950___ylbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02482___ylbB-BSU14950___ylbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02482___ylbB
# 2: BSU14950___ylbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     148/148 (100.0%)
# Similarity:   148/148 (100.0%)
# Gaps:           0/148 ( 0.0%)
# Score: 738.0
# 
#
#=======================================

BSNT_02482___      1 MTKIKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14950___yl      1 MTKIKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIV     50

BSNT_02482___     51 TDRDLVLRGIAIKKPNSQKITDAMTEKPVSVEEDASVDEVLHLMASHQLR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14950___yl     51 TDRDLVLRGIAIKKPNSQKITDAMTEKPVSVEEDASVDEVLHLMASHQLR    100

BSNT_02482___    101 RIPVTKNKKLTGIVTLGDLSLSEQTNERAGSALSDISEGDNREEGFFH    148
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU14950___yl    101 RIPVTKNKKLTGIVTLGDLSLSEQTNERAGSALSDISEGDNREEGFFH    148


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.