Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02443 and BSU14680

See DNA alignment / Visit BSNT_02443 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:14
# Commandline: needle
#    -asequence pep-align/BSNT_02443___ykzC.1.22522.seq
#    -bsequence pep-align/BSU14680___ykzC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02443___ykzC-BSU14680___ykzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02443___ykzC-BSU14680___ykzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02443___ykzC
# 2: BSU14680___ykzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:     137/155 (88.4%)
# Similarity:   140/155 (90.3%)
# Gaps:          13/155 ( 8.4%)
# Score: 734.0
# 
#
#=======================================

BSNT_02443___      1 MLGSRPFEQDDLSLLEKLAEAHPVWKEEEFGDKDAQDYIISYSMYNGVWL     50
                                  :|||||||||||||||||||||:|||||||||||.||
BSU14680___yk      1 -------------MLEKLAEAHPVWKEEEFGDKDAEDYIISYSMYNGSWL     37

BSNT_02443___     51 VWEKDGLPVAVSYHLEWSPSNGKPWLGTVLIDPAEEKKGHAKMIIEQISK    100
                     ||||||:|||||||||||||||||||||||||||||||||||||||||||
BSU14680___yk     38 VWEKDGMPVAVSYHLEWSPSNGKPWLGTVLIDPAEEKKGHAKMIIEQISK     87

BSNT_02443___    101 LLRAKHKAMFAGVPIERSEWILFLSQCGFEQLKTEKDEKGKSFMILVKPL    150
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU14680___yk     88 LLRAKHKAMFAGVPIERREWILFLSQCGFEQLKTEKDEKGKSFMILVKPL    137

BSNT_02443___    151 AEAAV    155
                     |||||
BSU14680___yk    138 AEAAV    142


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.