Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02431 and BSU14590

See DNA alignment / Visit BSNT_02431 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:13
# Commandline: needle
#    -asequence pep-align/BSNT_02431___pdhB.1.22522.seq
#    -bsequence pep-align/BSU14590___pdhB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02431___pdhB-BSU14590___pdhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02431___pdhB-BSU14590___pdhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02431___pdhB
# 2: BSU14590___pdhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity:     324/325 (99.7%)
# Similarity:   325/325 (100.0%)
# Gaps:           0/325 ( 0.0%)
# Score: 1631.0
# 
#
#=======================================

BSNT_02431___      1 MAQMTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14590___pd      1 MAQMTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGE     50

BSNT_02431___     51 DRVFDTPLAESGIGGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMAR    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14590___pd     51 DRVFDTPLAESGIGGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMAR    100

BSNT_02431___    101 MRYRSGGRWTSPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPST    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14590___pd    101 MRYRSGGRWTSPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPST    150

BSNT_02431___    151 PYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEEYTIELGKADVKR    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14590___pd    151 PYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEEYTIELGKADVKR    200

BSNT_02431___    201 EGTDLSIITYGAMVHESLKAAEELEKDGISAEVVDLRTVSPLDIDTIIAS    250
                     |||||||||||||||||||||:||||||||||||||||||||||||||||
BSU14590___pd    201 EGTDLSIITYGAMVHESLKAADELEKDGISAEVVDLRTVSPLDIDTIIAS    250

BSNT_02431___    251 VEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFP    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14590___pd    251 VEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFP    300

BSNT_02431___    301 FSQAESVWLPNHKDVLETARKVLEF    325
                     |||||||||||||||||||||||||
BSU14590___pd    301 FSQAESVWLPNHKDVLETARKVLEF    325


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.