Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02408 and BSU14440

See DNA alignment / Visit BSNT_02408 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:10
# Commandline: needle
#    -asequence pep-align/BSNT_02408___ykpB.1.22522.seq
#    -bsequence pep-align/BSU14440___ykpB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02408___ykpB-BSU14440___ykpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02408___ykpB-BSU14440___ykpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02408___ykpB
# 2: BSU14440___ykpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     296/303 (97.7%)
# Similarity:   299/303 (98.7%)
# Gaps:           0/303 ( 0.0%)
# Score: 1516.0
# 
#
#=======================================

BSNT_02408___      1 MKFLVVGAGGVGGYIGGRLSEKGNDVTFLVRQKRAEQLKKTGLVIHSEKG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk      1 MKFLVVGAGGVGGYIGGRLSEKGNDVTFLVRQKRAEQLKKTGLVIHSEKG     50

BSNT_02408___     51 NVSFQPELISAGETGQFDVVIIASKAYSLVQVIDDVKPFIHQESVILPFL    100
                     |||||||||||||||||||||||||||||.|||:||||||||||||:|||
BSU14440___yk     51 NVSFQPELISAGETGQFDVVIIASKAYSLGQVIEDVKPFIHQESVIIPFL    100

BSNT_02408___    101 NGYRHYEQLFAAFSKEQVLGGLCFIESALDNKGEIHHTSASHRFVFGEWN    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    101 NGYRHYEQLFAAFSKEQVLGGLCFIESALDNKGEIHHTSASHRFVFGEWN    150

BSNT_02408___    151 GERTERIRAFEEAFSGVKAEVIISGHIEKDIWKKYLFIAAQAGITTLFQR    200
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU14440___yk    151 GERTERIRALEEAFSGVKAEVIISGHIEKDIWKKYLFIAAQAGITTLFQR    200

BSNT_02408___    201 PLGPILATEAGRHTAQTLIGEICAVLRKEGVPADPDLEEESFRTMTSMSY    250
                     |||||||||||||||||||||||.|||||||||||.||||||||||||||
BSU14440___yk    201 PLGPILATEAGRHTAQTLIGEICTVLRKEGVPADPALEEESFRTMTSMSY    250

BSNT_02408___    251 HMKSSMLRDMENGQTTEGDHLHGFLLEKAKRLSLAAPVLETVYANLQMYE    300
                     |||||||||||||||||||||||||:||||||||||||||||||||||||
BSU14440___yk    251 HMKSSMLRDMENGQTTEGDHLHGFLIEKAKRLSLAAPVLETVYANLQMYE    300

BSNT_02408___    301 AEK    303
                     |||
BSU14440___yk    301 AEK    303


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