Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02374 and BSU14230

See DNA alignment / Visit BSNT_02374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:06
# Commandline: needle
#    -asequence pep-align/BSNT_02374___ykuV.1.22522.seq
#    -bsequence pep-align/BSU14230___ykuV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02374___ykuV-BSU14230___ykuV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02374___ykuV-BSU14230___ykuV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02374___ykuV
# 2: BSU14230___ykuV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     146/148 (98.6%)
# Similarity:   147/148 (99.3%)
# Gaps:           0/148 ( 0.0%)
# Score: 775.0
# 
#
#=======================================

BSNT_02374___      1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14230___yk      1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQ     50

BSNT_02374___     51 VNEFRDKYQDQLNVVAVHMPRSEDDLDLGKIKETAAEHDITQPIFVDSDH    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU14230___yk     51 VNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDH    100

BSNT_02374___    101 ALTDSFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE    148
                     ||||:|||||||||||||||||||||||||||||||||||||||||||
BSU14230___yk    101 ALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE    148


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.