Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02339 and BSU13970

See DNA alignment / Visit BSNT_02339 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:01
# Commandline: needle
#    -asequence pep-align/BSNT_02339___ykwD.1.22522.seq
#    -bsequence pep-align/BSU13970___ykwD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02339___ykwD-BSU13970___ykwD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02339___ykwD-BSU13970___ykwD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02339___ykwD
# 2: BSU13970___ykwD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     232/257 (90.3%)
# Similarity:   235/257 (91.4%)
# Gaps:          17/257 ( 6.6%)
# Score: 1153.0
# 
#
#=======================================

BSNT_02339___      1 MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNMSLND     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk      1 MKKAFILSAAAAVGLFTFGGVQQASAKELSCQPVVTVKTGNTVQNMSLND     50

BSNT_02339___     51 AVKKLHINTNIKTLNAANEKEIKQFLQKHAKQSNVKVQDVQKTETAKPAQ    100
                     |||||||||||||||||||||:||.|||||||||||||||||||||||||
BSU13970___yk     51 AVKKLHINTNIKTLNAANEKEMKQLLQKHAKQSNVKVQDVQKTETAKPAQ    100

BSNT_02339___    101 KTTEKAAADQNTASKAPATAEKTNTTTSAPSSVSAYEKKVVELTNAERQK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    101 KTTEKAAADQNTASKAPATAEKTNTTTSAPSSVSAYEKKVVELTNAERQK    150

BSNT_02339___    151 QGLKPLQIDETLSKSARAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGISY    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13970___yk    151 QGLKPLQIDETLSKSARAKSQDMKDKNYFDHQSPTYGSPFDMMKSFGISY    200

BSNT_02339___    201 KTAGENIAKGQKTPEEVVKAWMNSEGHRKNILNGSVI-LTV---------    240
                     |||||||||||||||||||||||||||||||||.:.. :.|         
BSU13970___yk    201 KTAGENIAKGQKTPEEVVKAWMNSEGHRKNILNPNFTHIGVGYVESGSIW    250

BSNT_02339___    240 -------    240
                            
BSU13970___yk    251 TQQFIGK    257


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.