Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02308 and BSU13740

See DNA alignment / Visit BSNT_02308 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:57
# Commandline: needle
#    -asequence pep-align/BSNT_02308___ykvL.1.22522.seq
#    -bsequence pep-align/BSU13740___queE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02308___ykvL-BSU13740___queE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02308___ykvL-BSU13740___queE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02308___ykvL
# 2: BSU13740___queE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     240/243 (98.8%)
# Similarity:   240/243 (98.8%)
# Gaps:           0/243 ( 0.0%)
# Score: 1260.0
# 
#
#=======================================

BSNT_02308___      1 MAKGIPVLEIFGPTIQGEGMVIGQKTMFVRTAGCDYSCSWCDSAFTWDGS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13740___qu      1 MAKGIPVLEIFGPTIQGEGMVIGQKTMFVRTAGCDYSCSWCDSAFTWDGS     50

BSNT_02308___     51 AKKDIRWMTAEEIFAELKDIGGDAFSHVTISGGNPALLKQLDVFIELLKE    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU13740___qu     51 AKKDIRWMTAEEIFAELKDIGGDAFSHVTISGGNPALLKQLDAFIELLKE    100

BSNT_02308___    101 NNIRAALETQGTVYQDWFTLIDDLTISPKPPSSKMVTNFQKLDHILTSLQ    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13740___qu    101 NNIRAALETQGTVYQDWFTLIDDLTISPKPPSSKMVTNFQKLDHILTSLQ    150

BSNT_02308___    151 ENDRQHAVSLKVVIFNDEDLEFAKMVHKRYPGIPFYLQVGNDDVHTTDDQ    200
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU13740___qu    151 ENDRQHAVSLKVVIFNDEDLEFAKTVHKRYPGIPFYLQVGNDDVHTTDDQ    200

BSNT_02308___    201 SLITHLLGKYEALVDKVAVDAELNLVRVLPQLHTLLWGNKRGV    243
                     |||.|||||||||||||||||||||||||||||||||||||||
BSU13740___qu    201 SLIAHLLGKYEALVDKVAVDAELNLVRVLPQLHTLLWGNKRGV    243


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