Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02293 and BSU13650

See DNA alignment / Visit BSNT_02293 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:55
# Commandline: needle
#    -asequence pep-align/BSNT_02293.1.22522.seq
#    -bsequence pep-align/BSU13650___eag.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02293-BSU13650___eag.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02293-BSU13650___eag.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02293
# 2: BSU13650___eag
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     113/143 (79.0%)
# Similarity:   113/143 (79.0%)
# Gaps:          28/143 (19.6%)
# Score: 588.0
# 
#
#=======================================

BSNT_02293         1 MKELAILITEMVNQFHDAFISLCGIFGIHLTDKEMHFWVIGIFGIFFFGV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13650___ea      1 MKELAILITEMVNQFHDAFISLCGIFGIHLTDKEMHFWVIGIFGIFFFGV     50

BSNT_02293        51 THAVFTWLSKWSMTALSFIYTVTVIIVIVFAIEIQQKVTGRGNMEFLDAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13650___ea     51 THAVFTWLSKWSMTALSFIYTVTVIIVIVFAIEIQQKVTGRGNMEFLDAT    100

BSNT_02293       101 EGIKGFLVFFMFFCF----------------------------    115
                     |||||||||||||..                            
BSU13650___ea    101 EGIKGFLVFFMFFLLLKMLLRFIKILFSGRPASKSNGNARSRR    143


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.